MOLDRAW: a program to display and manipulate molecular and crystalline structures

 

by Piero UGLIENGO  University of Torino - Dipartimento Chimica. Via P. Giuria 7 -10125 Torino. ITALY

MS Windows (Linux & Mac OS X) - 
http://www.moldraw.unito.it  

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Topics

New structure
Saving
Merging
Perspective
Crystal cell
Crystal box
Manipulation
Gaussian98
CRYSTAL
MOPAC
VASP
Nice pictures
Chime structures
Jmol structures
Viewing

Crystal cell and packing


 

Once the structure defined in the .MOL file is read by MOLDRAW the unit cell contents can be easily generated. This only applies to structures which have a unit cell edges (a, b, c) different from the unity. Indeed for an orthonormal reference system, the structure is defined in cartesian coordinates and the generation of the unit cell content is meaningless.

 

To check the definition of the unit cell for the actual structure go to (File--->Info) menu. A summary of the main structural feature will be shown.

 


 

 

In order to generate the crystal cell content the space group should also be provide. Usually it is reported in the same source used to take the fractional coordinates.

See the examples section (the case of benzene molecular crystal) to discover how to provide space group information.

After reading a crystal structure with the symmetry information open the

(Crystal--->Make cell) menu or more directly click the Cell keyword in the toolbar. The unit cell content is generated.

 

A better view of the crystal structure is given by open the

(Crystal--->Make packing...) menu or more directly by clicking the Pack keyword in the toolbar. By moving the sliders, portion of the structure close to the cell edges are included. To include crystal portions larger than one unit cell refer to the Crystal box option.

 

Below the unit cell and a packing of the calcium fluoride (CaF2) crystal is shown.

 

 


 

 

 

 

 


 


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